To find the missed packages we can use the following command:

awk '$4=="E"' /var/cpanel/updatelogs/last

It will allow us to see the missed RPMs and install them after via yum.

The original article is stored here

To fix the issue, you need to execute the following command:

grub2-mkconfig -o /boot/efi/EFI/centos/grub.cfg;grub2-mkconfig -o /boot/efi/EFI/centos/grub.cfg;reboot

in the file /etc/selinux/config
need replace the value for option SELINUX from:

SELINUX=enforcing

to:

SELINUX=disabled

And then reboot the server.